If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 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'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 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'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' 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'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 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'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 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'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 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'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 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'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 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'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 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'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 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'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 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'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 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'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 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'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 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'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 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'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 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'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 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'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 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'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 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'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 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'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 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'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 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'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 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'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 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'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 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'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 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'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 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'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 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'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 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'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 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'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 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'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 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'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 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'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 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'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 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'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 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'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 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'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 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'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 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'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 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'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 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'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 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'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 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'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 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'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 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'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 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'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 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'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 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'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 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'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 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'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 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'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 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'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 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'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 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'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 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'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 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'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 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'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 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'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 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'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 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'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 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'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ), 'gf_id' => 'HOM05D000529', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000529' ), 'data_identifier' => 'HOM05D000529', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000529', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04930' => 'bna', 'A02p38850' => 'bna', 'A06p36590' => 'bna', 'A06p36600' => 'bna', 'A06p41020' => 'bna', 'A07p16990' => 'bna', 'A07p17000' => 'bna', 'A08p17700' => 'bna', 'A09p09670' => 'bna', 'A09p09690' => 'bna', 'A10p31440' => 'bna', 'Aa31LG10G6760' => 'aar', 'Aa31LG11G5560' => 'aar', 'Aa31LG11G5570' => 'aar', 'Aa31LG1G15460' => 'aar', 'Aa31LG7G9260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4244' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.3868' => 'aag', 'Actinidia12227' => 'ach', 'Actinidia15273' => 'ach', 'Actinidia22597' => 'ach', 'Actinidia30857' => 'ach', 'Ah.05g178400' => 'amhyb', 'AL1G47950' => 'aly', 'AL6G14380' => 'aly', 'AL7G18240' => 'aly', 'AL7G19240' => 'aly', 'AL8G44480' => 'aly', 'AL8G44490' => 'aly', 'AL8G44500' => 'aly', 'AL8G44510' => 'aly', 'Aqoxy5G01761_Aqoxy5G01762' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3L0H24' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4KB2JU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4XA800' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BJ32EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDD4S1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EI55Q9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EUC3GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FF44RV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FT124Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GG3E31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HV9GRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M35DT6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MIV8ZD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MR8NY8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NSA2XE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3UCZQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5DEH8' => 'arhy', 'AT1G33560' => 'ath', 'AT3G26470' => 'ath', 'AT4G33300' => 'ath', 'AT5G04720' => 'ath', 'AT5G47280' => 'ath', 'AT5G66890' => 'ath', 'AT5G66900' => 'ath', 'AT5G66910' => 'ath', 'ATR0767G137' => 'atr', 'Atru.chr13.609' => 'acertr', 'AUR62031372' => 'cqu', 'AUR62033886' => 'cqu', 'BcaB02g09973' => 'bca', 'BcaB02g09974' => 'bca', 'BcaB03g12806' => 'bca', 'BcaB03g13136' => 'bca', 'BcaB04g20089' => 'bca', 'BcaB04g20090' => 'bca', 'BcaB04g20091' => 'bca', 'BcaB04g20092' => 'bca', 'BcaB04g20101' => 'bca', 'BcaB04g20245' => 'bca', 'BcaB05g21751' => 'bca', 'BcaB05g21752' => 'bca', 'BcaB08g34626' => 'bca', 'BcaB08g34628' => 'bca', 'BcaC01g00997' => 'bca', 'BcaC03g12938' => 'bca', 'BcaC03g17818' => 'bca', 'BcaC04g23168' => 'bca', 'BcaC04g23170' => 'bca', 'BcaC05g26942' => 'bca', 'BcaC06g30971' => 'bca', 'BcaC06g32180' => 'bca', 'BcaC06g33794' => 'bca', 'BcaC06g33796' => 'bca', 'BcaC06g34763' => 'bca', 'BcaC07g38695' => 'bca', 'BcaC07g38696' => 'bca', 'BcaC07g39623' => 'bca', 'BcaC09g52139' => 'bca', 'BcaC09g52148' => 'bca', 'BcaC09g52150' => 'bca', 'BolC1t00513H' => 'bol', 'BolC1t00516H' => 'bol', 'BolC1t00641H' => 'bol', 'BolC2t06160H' => 'bol', 'BolC2t10946H' => 'bol', 'BolC2t11903H' => 'bol', 'BolC2t11904H' => 'bol', 'BolC2t11905H' => 'bol', 'BolC2t12530H' => 'bol', 'BolC2t12531H' => 'bol', 'BolC2t12532H' => 'bol', 'BolC3t20969H' => 'bol', 'BolC5t31516H' => 'bol', 'BolC7t43013H' => 'bol', 'BolC7t44188H' => 'bol', 'BolC7t44191H' => 'bol', 'BolC7t44192H' => 'bol', 'BolC7t44194H' => 'bol', 'BolC8t49245H' => 'bol', 'BolC8t49246H' => 'bol', 'BolC9t54031H' => 'bol', 'BolC9t54032H' => 'bol', 'BolC9t54033H' => 'bol', 'BolC9t54034H' => 'bol', 'BolC9t54048H' => 'bol', 'BolC9t59956H' => 'bol', 'BolC9t59957H' => 'bol', 'BraA01t00475Z' => 'bra', 'BraA02t08859Z' => 'bra', 'BraA06t26585Z' => 'bra', 'BraA06t27023Z' => 'bra', 'BraA06t27024Z' => 'bra', 'BraA06t27026Z' => 'bra', 'BraA07t29426Z' => 'bra', 'BraA07t29427Z' => 'bra', 'BraA08t33720Z' => 'bra', 'BraA09t36615Z' => 'bra', 'BraA09t36616Z' => 'bra', 'BraA10t45190Z' => 'bra', 'C01p05330' => 'bna', 'C01p05360' => 'bna', 'C01p06470' => 'bna', 'C02p02030' => 'bna', 'C02p58420' => 'bna', 'C02p64690' => 'bna', 'C02p64700' => 'bna', 'C03p86760' => 'bna', 'C05p27900' => 'bna', 'C07p24850' => 'bna', 'C07p36720' => 'bna', 'C07p36750' => 'bna', 'C07p36760' => 'bna', 'C07p36780' => 'bna', 'C07p36810' => 'bna', 'C08p16260' => 'bna', 'C08p16270' => 'bna', 'C09p11430' => 'bna', 'C09p11440' => 'bna', 'C09p11460' => 'bna', 'C09p11470' => 'bna', 'C09p11570' => 'bna', 'C09p72120' => 'bna', 'C09p72130' => 'bna', 'CAN.G209.23' => 'can', 'CAN.G371.66' => 'can', 'CAN.G836.51' => 'can', 'CAN.G836.52' => 'can', 'CANSAT01G0169' => 'cansat', 'CANSAT01G2617' => 'cansat', 'CANSAT25G0052' => 'cansat', 'CARHR033000' => 'chi', 'CARHR033010' => 'chi', 'CARHR033020' => 'chi', 'CARHR033030' => 'chi', 'CARHR033040' => 'chi', 'CARHR176930' => 'chi', 'CARHR177820' => 'chi', 'CARHR177840' => 'chi', 'CARHR177850' => 'chi', 'CARHR208570' => 'chi', 'CARHR240480' => 'chi', 'CARHR241370' => 'chi', 'CARHR286830' => 'chi', 'CARHR289020' => 'chi', 'CARHR289030' => 'chi', 'CARHR289040' => 'chi', 'CARHR289280' => 'chi', 'CARHR289650' => 'chi', 'CARHR292110' => 'chi', 'CARHR292120' => 'chi', 'CARHR292450' => 'chi', 'Carub.0001s3174' => 'cru', 'Carub.0006s0361' => 'cru', 'Carub.0007s0717' => 'cru', 'Carub.0008s0668' => 'cru', 'Carub.0008s0669' => 'cru', 'Carub.0008s2759' => 'cru', 'Carub.0008s2760' => 'cru', 'Ca_13313_v3' => 'car', 'Ca_13314_v3' => 'car', 'Ca_22204_v3' => 'car', 'Ca_22205_v3' => 'car', 'Ca_22206_v3' => 'car', 'Ca_24796_v3' => 'car', 'CBR_g22931' => 'cbr', 'CBR_g2748' => 'cbr', 'CBR_g2751' => 'cbr', 'CBR_g32554' => 'cbr', 'CBR_g37007' => 'cbr', 'CBR_g37014' => 'cbr', 'CBR_g37018' => 'cbr', 'CBR_g37027' => 'cbr', 'CBR_g45212' => 'cbr', 'CBR_g46427' => 'cbr', 'CBR_g50312' => 'cbr', 'CBR_g50717' => 'cbr', 'CBR_g50726' => 'cbr', 'CBR_g57143' => 'cbr', 'Cc07_g05690' => 'ccan', 'Cc07_g05700' => 'ccan', 'Cc10_g03810' => 'ccan', 'Cfa003969' => 'cfa', 'Cfa003970' => 'cfa', 'Cfa003971' => 'cfa', 'Cfa003972' => 'cfa', 'Cfa018498' => 'cfa', 'Cfa018573' => 'cfa', 'Cfa021022' => 'cfa', 'Ciclev10000281m.g' => 'ccl', 'Ciclev10018897m.g' => 'ccl', 'Ciclev10024907m.g' => 'ccl', 'CiPaw.01G023600' => 'cil', 'CiPaw.01G024000' => 'cil', 'CiPaw.01G024100' => 'cil', 'CiPaw.01G024200' => 'cil', 'CiPaw.01G024400' => 'cil', 'CiPaw.01G024500' => 'cil', 'CiPaw.01G024600' => 'cil', 'CiPaw.01G024700' => 'cil', 'CiPaw.01G024800' => 'cil', 'CiPaw.01G025000' => 'cil', 'CiPaw.01G025100' => 'cil', 'CiPaw.01G025200' => 'cil', 'CiPaw.01G025300' => 'cil', 'CiPaw.01G025500' => 'cil', 'CiPaw.01G103200' => 'cil', 'CiPaw.02G010600' => 'cil', 'CiPaw.02G074900' => 'cil', 'CiPaw.15G065600' => 'cil', 'ClCG01G016630' => 'cla', 'ClCG05G019540' => 'cla', 'COL.COLO4_11350' => 'col', 'COL.COLO4_26439' => 'col', 'COL.COLO4_30095' => 'col', 'Cpa.g.sc6.400' => 'cpa', 'Cpa.g.sc6.401' => 'cpa', 'Cpa.g.sc6.402' => 'cpa', 'Cpa.g.sc64.11' => 'cpa', 'Cpa.g.sc64.12' => 'cpa', 'CsaV3_2G004400' => 'csa', 'CsaV3_4G034000' => 'csa', 'CsaV3_6G043030' => 'csa', 'CSS0009502' => 'camsi', 'CSS0009849' => 'camsi', 'CSS0015606' => 'camsi', 'CSS0017568' => 'camsi', 'CSS0019496' => 'camsi', 'CSS0020808' => 'camsi', 'CSS0046943' => 'camsi', 'DCAR_003453' => 'dca', 'DCAR_010928' => 'dca', 'DCAR_015522' => 'dca', 'DCAR_020939' => 'dca', 'DCAR_021433' => 'dca', 'DCAR_021434' => 'dca', 'DCAR_021436' => 'dca', 'Dinv20744' => 'din', 'Dinv29949' => 'din', 'Dinv29950' => 'din', 'Dinv36002' => 'din', 'Dinv39347' => 'din', 'Dinv39897' => 'din', 'Dinv42680' => 'din', 'Duzib041G0187' => 'dzi', 'Duzib089G0003' => 'dzi', 'Duzib093G1494' => 'dzi', 'Duzib147G1638' => 'dzi', 'Duzib248G0044' => 'dzi', 'Duzib248G0245' => 'dzi', 'Duzib264G0020' => 'dzi', 'Duzib264G0157' => 'dzi', 'ECA232G1175' => 'eca', 'ECA233G4251' => 'eca', 'ECA238G0033' => 'eca', 'ECA238G2044' => 'eca', 'ECA238G2361' => 'eca', 'ECA247G1205' => 'eca', 'ECA248G0195' => 'eca', 'ECA248G0280' => 'eca', 'EL10Ac1g01813' => 'bvu', 'Eucgr.E03711' => 'egr', 'Eucgr.F02383' => 'egr', 'Eucgr.I00978' => 'egr', 'Eucgr.I00980' => 'egr', 'Eucgr.I00981' => 'egr', 'Eucgr.I00985' => 'egr', 'Eucgr.L02076' => 'egr', 'Eucgr.L02779' => 'egr', 'FAN01G1589' => 'fan', 'FAN02G0107' => 'fan', 'FAN02G0238' => 'fan', 'FAN02G0426' => 'fan', 'FAN02G0723' => 'fan', 'FAN02G2651' => 'fan', 'FAN02G4253' => 'fan', 'FAN02G4337' => 'fan', 'FAN03G0318' => 'fan', 'FAN03G1628' => 'fan', 'FAN04G0134' => 'fan', 'FAN04G0459' => 'fan', 'FAN05G0295' => 'fan', 'FAN05G0579' => 'fan', 'FAN05G0900' => 'fan', 'FAN05G1535' => 'fan', 'FAN05G2207' => 'fan', 'FAN08G1780' => 'fan', 'FAN08G2243' => 'fan', 'FAN08G3343' => 'fan', 'FAN09G0210' => 'fan', 'FAN09G0721' => 'fan', 'FAN09G0851' => 'fan', 'FAN09G1778' => 'fan', 'FAN09G1816' => 'fan', 'FAN09G2286' => 'fan', 'FAN09G2871' => 'fan', 'FAN09G3452' => 'fan', 'FAN09G3823' => 'fan', 'FAN09G4107' => 'fan', 'FAN09G4471' => 'fan', 'FAN11G3603' => 'fan', 'FAN12G2827' => 'fan', 'FAN13G0044' => 'fan', 'FAN13G0667' => 'fan', 'FAN14G0070' => 'fan', 'FAN14G0251' => 'fan', 'FAN14G0868' => 'fan', 'FAN14G1290' => 'fan', 'FAN14G1876' => 'fan', 'FAN14G2114' => 'fan', 'FAN14G2274' => 'fan', 'FAN14G2370' => 'fan', 'FAN14G2378' => 'fan', 'FAN14G3438' => 'fan', 'FAN14G3783' => 'fan', 'FAN14G5001' => 'fan', 'FAN14G5972' => 'fan', 'FAN15G0087' => 'fan', 'FAN15G0230' => 'fan', 'FAN15G2367' => 'fan', 'FAN18G0440' => 'fan', 'FAN18G0682' => 'fan', 'FAN18G1889' => 'fan', 'FAN18G1950' => 'fan', 'FAN19G0094' => 'fan', 'FAN19G0833' => 'fan', 'FAN19G2325' => 'fan', 'FAN19G2554' => 'fan', 'FAN19G2597' => 'fan', 'FAN19G2604' => 'fan', 'FAN19G2633' => 'fan', 'FAN19G2660' => 'fan', 'FAN20G1143' => 'fan', 'FAN20G2602' => 'fan', 'FAN20G2659' => 'fan', 'FAN21G3418' => 'fan', 'FAN21G3685' => 'fan', 'FAN23G0006' => 'fan', 'FAN23G0041' => 'fan', 'FAN23G0179' => 'fan', 'FAN23G0247' => 'fan', 'FAN23G0688' => 'fan', 'FAN23G0831' => 'fan', 'FAN23G2222' => 'fan', 'FAN23G2692' => 'fan', 'FAN23G2757' => 'fan', 'FAN24G2157' => 'fan', 'FAN25G1210' => 'fan', 'FAN25G1553' => 'fan', 'FAN25G3181' => 'fan', 'FAN25G3278' => 'fan', 'FAN26G0571' => 'fan', 'FAN26G0790' => 'fan', 'FAN26G0958' => 'fan', 'FAN26G2366' => 'fan', 'FAN26G2892' => 'fan', 'FAN26G3207' => 'fan', 'FAN27G0934' => 'fan', 'FAN28G0376' => 'fan', 'FAN28G0545' => 'fan', 'FAN28G0672' => 'fan', 'FAN28G0855' => 'fan', 'FAN28G0936' => 'fan', 'FAN28G1040' => 'fan', 'FAN28G1580' => 'fan', 'FAN28G1852' => 'fan', 'FAN28G2498' => 'fan', 'FAN28G2659' => 'fan', 'FvH4_1g15090' => 'fve', 'FvH4_1g15120' => 'fve', 'FvH4_1g15130' => 'fve', 'FvH4_1g15140' => 'fve', 'FvH4_1g15150' => 'fve', 'FvH4_1g15160' => 'fve', 'FvH4_1g15170' => 'fve', 'FvH4_1g15171' => 'fve', 'FvH4_1g15200' => 'fve', 'FvH4_1g15210' => 'fve', 'FvH4_1g15220' => 'fve', 'FvH4_1g15230' => 'fve', 'FvH4_1g15240' => 'fve', 'FvH4_1g15330' => 'fve', 'FvH4_1g15380' => 'fve', 'FvH4_1g15390' => 'fve', 'FvH4_1g15500' => 'fve', 'FvH4_1g17470' => 'fve', 'FvH4_2g19760' => 'fve', 'FvH4_2g40720' => 'fve', 'FvH4_3g12800' => 'fve', 'FvH4_3g12820' => 'fve', 'FvH4_4g31860' => 'fve', 'FvH4_5g11130' => 'fve', 'FvH4_5g11201' => 'fve', 'FvH4_5g11231' => 'fve', 'FvH4_5g21530' => 'fve', 'FvH4_5g32810' => 'fve', 'FvH4_5g32820' => 'fve', 'FvH4_5g32830' => 'fve', 'FvH4_6g18970' => 'fve', 'FvH4_6g42370' => 'fve', 'FvH4_6g42380' => 'fve', 'FvH4_6g42390' => 'fve', 'FvH4_6g50100' => 'fve', 'FvH4_6g50110' => 'fve', 'FvH4_6g50120' => 'fve', 'FvH4_6g50130' => 'fve', 'FvH4_6g50140' => 'fve', 'FvH4_6g50310' => 'fve', 'FvH4_6g50311' => 'fve', 'FvH4_6g50330' => 'fve', 'Glyma.01G133100' => 'gma', 'Glyma.01G183300' => 'gma', 'Glyma.01G183400' => 'gma', 'Glyma.05G082200' => 'gma', 'Glyma.05G082400' => 'gma', 'Glyma.05G082500' => 'gma', 'Glyma.08G154367' => 'gma', 'Glyma.08G154433' => 'gma', 'Glyma.11G058900' => 'gma', 'Glyma.11G059001' => 'gma', 'Glyma.13G092200' => 'gma', 'Glyma.14G079500' => 'gma', 'Glyma.14G079600' => 'gma', 'Glyma.17G179200' => 'gma', 'Glyma.17G179400' => 'gma', 'Glyma.17G179500' => 'gma', 'Glyma.17G180000' => 'gma', 'Glyma.17G180100' => 'gma', 'Glyma.17G180300' => 'gma', 'Glyma.17G245500' => 'gma', 'Glyma.17G245600' => 'gma', 'Gohir.A01G118200' => 'ghi', 'Gohir.A05G199700' => 'ghi', 'Gohir.A11G189400' => 'ghi', 'Gohir.D01G106500' => 'ghi', 'Gohir.D05G202700' => 'ghi', 'Gohir.D05G263200' => 'ghi', 'Gohir.D11G196100' => 'ghi', 'Gorai.002G130700' => 'gra', 'Gorai.007G210000' => 'gra', 'Gorai.009G208600' => 'gra', 'Gorai.009G275000' => 'gra', 'GSVIVG01003555001' => 'vvi', 'GSVIVG01003562001' => 'vvi', 'GSVIVG01003565001' => 'vvi', 'GSVIVG01003566001' => 'vvi', 'GSVIVG01003569001' => 'vvi', 'GSVIVG01003570001' => 'vvi', 'GSVIVG01003571001' => 'vvi', 'GSVIVG01003572001' => 'vvi', 'GSVIVG01007143001' => 'vvi', 'GSVIVG01007144001' => 'vvi', 'GSVIVG01007146001' => 'vvi', 'GSVIVG01009576001' => 'vvi', 'GSVIVG01034428001' => 'vvi', 'GSVIVG01034429001' => 'vvi', 'GSVIVG01034432001' => 'vvi', 'GSVIVG01034433001' => 'vvi', 'HanXRQChr01g0010471' => 'han', 'HanXRQChr02g0046611' => 'han', 'HanXRQChr02g0048181' => 'han', 'HanXRQChr03g0067681' => 'han', 'HanXRQChr03g0073241' => 'han', 'HanXRQChr04g0095241' => 'han', 'HanXRQChr05g0129181' => 'han', 'HanXRQChr07g0191761' => 'han', 'HanXRQChr07g0191781' => 'han', 'HanXRQChr07g0191791' => 'han', 'HanXRQChr07g0191801' => 'han', 'HanXRQChr07g0191811' => 'han', 'HanXRQChr10g0305431' => 'han', 'HanXRQChr11g0331571' => 'han', 'HanXRQChr14g0430731' => 'han', 'HanXRQChr14g0444591' => 'han', 'HanXRQChr14g0444761' => 'han', 'HanXRQChr15g0489401' => 'han', 'HanXRQChr15g0489421' => 'han', 'Haze_15448' => 'cav', 'Haze_15450' => 'cav', 'Haze_15451' => 'cav', 'Haze_17507' => 'cav', 'Haze_17579' => 'cav', 'Hma1.2p1_0337F.1_g129230' => 'hma', 'Hund06330' => 'sun', 'Lalb_Chr05g0213151' => 'lal', 'Lalb_Chr05g0226741' => 'lal', 'Lalb_Chr05g0226801' => 'lal', 'Lalb_Chr05g0226841' => 'lal', 'Lalb_Chr05g0226851' => 'lal', 'Lalb_Chr16g0388421' => 'lal', 'Lalb_Chr16g0388441' => 'lal', 'Lalb_Chr24g0399151' => 'lal', 'Lj2g0013161' => 'lja', 'Lj4A138G40' => 'lonja', 'Lj4A138G41' => 'lonja', 'Lj4A138G42' => 'lonja', 'Lj4A49T79' => 'lonja', 'Lj4g0013898' => 'lja', 'Lj4g0014150' => 'lja', 'Lj4g0017861' => 'lja', 'Lj4g0018288' => 'lja', 'Lj4g0026036' => 'lja', 'Lj5g0004486' => 'lja', 'Lj5g0007019' => 'lja', 'Lj7A46T15' => 'lonja', 'Lj7A47T35' => 'lonja', 'Lj7A47T39' => 'lonja', 'Lj7A50G14' => 'lonja', 'Lj7A51G15' => 'lonja', 'Lj7A52G17' => 'lonja', 'Lj7A52T23' => 'lonja', 'Lj7C46T7' => 'lonja', 'Lj7C47G10' => 'lonja', 'Lj7C47T24' => 'lonja', 'Lj7C47T3' => 'lonja', 'Lj7C48G3' => 'lonja', 'Lj7C48T3' => 'lonja', 'Lj7C48T4' => 'lonja', 'Lj7C51G1' => 'lonja', 'Lj7C52T8' => 'lonja', 'Lj7C53G2' => 'lonja', 'LjContig00272g0009946' => 'lja', 'Lsat_1_v5_gn_1_105160' => 'lsa', 'Lsat_1_v5_gn_1_19281' => 'lsa', 'Lsat_1_v5_gn_4_104400' => 'lsa', 'Lsat_1_v5_gn_4_168440' => 'lsa', 'Lsat_1_v5_gn_4_168480' => 'lsa', 'Lsat_1_v5_gn_8_115321' => 'lsa', 'Lsat_1_v5_gn_9_122021' => 'lsa', 'Lsat_1_v5_gn_9_123541' => 'lsa', 'Lsat_1_v5_gn_9_123581' => 'lsa', 'Lsat_1_v5_gn_9_123601' => 'lsa', 'Lsat_1_v5_gn_9_125101' => 'lsa', 'Lsat_1_v5_gn_9_125141' => 'lsa', 'Lsat_1_v5_gn_9_29080' => 'lsa', 'Lsat_1_v5_gn_9_99361' => 'lsa', 'Manes.05G169600' => 'mes', 'Manes.12G094100' => 'mes', 'Manes.12G094200' => 'mes', 'Manes.13G128600' => 'mes', 'MBI16_g24703_MAGBIO' => 'mbi', 'MD00G1053700' => 'mdo', 'MD02G1164300' => 'mdo', 'MD02G1164400' => 'mdo', 'MD02G1164500' => 'mdo', 'MD02G1164700' => 'mdo', 'MD02G1164800' => 'mdo', 'MD02G1165200' => 'mdo', 'MD02G1165300' => 'mdo', 'MD02G1165400' => 'mdo', 'MD02G1165500' => 'mdo', 'MD02G1165600' => 'mdo', 'MD02G1165700' => 'mdo', 'MD02G1165800' => 'mdo', 'MD02G1165900' => 'mdo', 'MD02G1166000' => 'mdo', 'MD02G1166100' => 'mdo', 'MD02G1166300' => 'mdo', 'MD06G1115400' => 'mdo', 'MD08G1041800' => 'mdo', 'MD08G1042000' => 'mdo', 'MD08G1042100' => 'mdo', 'MD08G1042400' => 'mdo', 'MD08G1042500' => 'mdo', 'MD08G1084900' => 'mdo', 'MD15G1022900' => 'mdo', 'MD15G1263100' => 'mdo', 'MD15G1263200' => 'mdo', 'MD15G1263300' => 'mdo', 'MD15G1276900' => 'mdo', 'MD15G1277200' => 'mdo', 'MD15G1277300' => 'mdo', 'MD15G1277400' => 'mdo', 'MD15G1277500' => 'mdo', 'MD15G1277700' => 'mdo', 'MD15G1277800' => 'mdo', 'MD15G1277900' => 'mdo', 'MD15G1278000' => 'mdo', 'MD15G1278100' => 'mdo', 'MD15G1278400' => 'mdo', 'MD15G1278600' => 'mdo', 'Medtr0391s0020' => 'mtr', 'Medtr1g021100' => 'mtr', 'Medtr1g021110' => 'mtr', 'Medtr5g018060' => 'mtr', 'Medtr5g018070' => 'mtr', 'Medtr5g018110' => 'mtr', 'Medtr5g018120' => 'mtr', 'Medtr5g018130' => 'mtr', 'Medtr5g018140' => 'mtr', 'Medtr5g018160' => 'mtr', 'Medtr5g018170' => 'mtr', 'Medtr5g018210' => 'mtr', 'Medtr5g018910' => 'mtr', 'Medtr5g068180' => 'mtr', 'Medtr6g015570' => 'mtr', 'Medtr7g010870' => 'mtr', 'Medtr7g024973' => 'mtr', 'Medtr7g024980' => 'mtr', 'Medtr7g024990' => 'mtr', 'Medtr8g079280' => 'mtr', 'Medtr8g079350' => 'mtr', 'Medtr8g079355' => 'mtr', 'Medtr8g079360' => 'mtr', 'Medtr8g079380' => 'mtr', 'Medtr8g079400' => 'mtr', 'Medtr8g079450' => 'mtr', 'Medtr8g079520' => 'mtr', 'Medtr8g079550' => 'mtr', 'Medtr8g479430' => 'mtr', 'Medtr8g479450' => 'mtr', 'MELO3C004354.2' => 'cme', 'MELO3C007539.2' => 'cme', 'MELO3C016725.2' => 'cme', 'Migut.C00618' => 'egut', 'Migut.M00554' => 'egut', 'MSTRG.1325' => 'ama', 'MSTRG.25117' => 'ama', 'MSTRG.2907' => 'ama', 'Nitab4.5_0000068g0290' => 'nta', 'Nitab4.5_0000681g0070' => 'nta', 'Nitab4.5_0000806g0130' => 'nta', 'Nitab4.5_0002157g0040' => 'nta', 'Nitab4.5_0005577g0010' => 'nta', 'Nitab4.5_0007024g0050' => 'nta', 'Nitab4.5_0009901g0030' => 'nta', 'Nitab4.5_0024858g0010' => 'nta', 'Nn1g08931' => 'nnu', 'Nn1g08932' => 'nnu', 'Nn4g24847' => 'nnu', 'Nn5g29350' => 'nnu', 'Nn5g29351' => 'nnu', 'Nn5g29352' => 'nnu', 'Nn5g29354' => 'nnu', 'Nn6g32089' => 'nnu', 'Nn6g32090' => 'nnu', 'Nn6g32091' => 'nnu', 'Nn6g32096' => 'nnu', 'Nn6g32097' => 'nnu', 'Oeu001181.2' => 'oeu', 'Oeu005309.1' => 'oeu', 'Oeu005312.1' => 'oeu', 'Oeu009568.1' => 'oeu', 'Oeu033639.1' => 'oeu', 'Oeu036715.1' => 'oeu', 'Oeu036791.1' => 'oeu', 'Oeu036793.1' => 'oeu', 'Oeu036802.1' => 'oeu', 'Oeu036806.1' => 'oeu', 'Oeu036816.1' => 'oeu', 'Oeu036817.1' => 'oeu', 'Os12g0586000' => 'osa', 'Peaxi162Scf00223g00031' => 'pax', 'Peaxi162Scf00993g00326' => 'pax', 'Peaxi162Scf01092g00129' => 'pax', 'PGR031G1757' => 'pgr', 'PGR031G2883' => 'pgr', 'PGR031G3276' => 'pgr', 'PGR102G0291' => 'pgr', 'PGR102G0329' => 'pgr', 'PGR102G1567' => 'pgr', 'PGR102G1677' => 'pgr', 'PGR102G1711' => 'pgr', 'PGSC0003DMG400007999' => 'stu', 'PGSC0003DMG400010226' => 'stu', 'Phvul.001G018800' => 'pvu', 'Phvul.001G018900' => 'pvu', 'Phvul.002G021700' => 'pvu', 'Phvul.003G247200' => 'pvu', 'Phvul.003G247300' => 'pvu', 'Phvul.003G247400' => 'pvu', 'Phvul.003G247500' => 'pvu', 'Phvul.003G247550' => 'pvu', 'Phvul.003G247601' => 'pvu', 'Phvul.003G247651' => 'pvu', 'Potri.002G129300' => 'ptr', 'Potri.007G038700' => 'ptr', 'Potri.007G038800' => 'ptr', 'Potri.007G038900' => 'ptr', 'Potri.007G039000' => 'ptr', 'Potri.007G039100' => 'ptr', 'Potri.007G039201' => 'ptr', 'Potri.007G039300' => 'ptr', 'Potri.009G091700' => 'ptr', 'Potri.014G035700' => 'ptr', 'Pp3c3_1460' => 'ppa', 'Prupe.1G389500' => 'ppe', 'Prupe.5G127600' => 'ppe', 'Prupe.5G127700' => 'ppe', 'Prupe.5G127900' => 'ppe', 'Prupe.7G138500' => 'ppe', 'Prupe.7G138600' => 'ppe', 'Prupe.7G138700' => 'ppe', 'Prupe.7G138800' => 'ppe', 'Prupe.7G138900' => 'ppe', 'Prupe.7G139100' => 'ppe', 'Prupe.7G139200' => 'ppe', 'Prupe.7G139500' => 'ppe', 'Prupe.7G139600' => 'ppe', 'Prupe.7G139700' => 'ppe', 'Prupe.7G139800' => 'ppe', 'Prupe.7G140400' => 'ppe', 'Psat0s3352g0160' => 'psa', 'Psat0s3924g0040' => 'psa', 'Psat2g164720' => 'psa', 'Psat4g088440' => 'psa', 'Psat4g088480' => 'psa', 'Psat4g088560' => 'psa', 'Psat4g088600' => 'psa', 'Psat4g088680' => 'psa', 'Psat6g011240' => 'psa', 'Psat6g011280' => 'psa', 'Psat6g011320' => 'psa', 'PSO210G1099' => 'pso', 'QL01p034705' => 'qlo', 'QL01p034712' => 'qlo', 'QL01p034905' => 'qlo', 'QL01p034976' => 'qlo', 'QL01p034998' => 'qlo', 'QL01p035044' => 'qlo', 'QL01p035125' => 'qlo', 'QL02p006227' => 'qlo', 'QL02p078112' => 'qlo', 'QL03p040686' => 'qlo', 'QL03p040701' => 'qlo', 'QL03p042701' => 'qlo', 'QL03p070309' => 'qlo', 'QL03p072647' => 'qlo', 'QL03p072768' => 'qlo', 'QL06p028385' => 'qlo', 'QL06p042786' => 'qlo', 'QL06p042817' => 'qlo', 'QL06p042829' => 'qlo', 'QL06p042852' => 'qlo', 'QL06p042938' => 'qlo', 'QL06p042956' => 'qlo', 'QL06p042986' => 'qlo', 'QL06p043010' => 'qlo', 'QL06p043036' => 'qlo', 'QL06p043050' => 'qlo', 'QL06p043060' => 'qlo', 'QL06p043076' => 'qlo', 'QL06p043096' => 'qlo', 'QL06p043133' => 'qlo', 'QL06p043189' => 'qlo', 'QL06p043208' => 'qlo', 'QL06p043215' => 'qlo', 'QL06p043250' => 'qlo', 'QL06p043260' => 'qlo', 'QL09p003347' => 'qlo', 'QL09p003356' => 'qlo', 'QL09p003378' => 'qlo', 'QL09p004530' => 'qlo', 'QL09p004537' => 'qlo', 'QL09p004566' => 'qlo', 'QL09p004591' => 'qlo', 'QL10p057118' => 'qlo', 'QL93p0205_0245' => 'qlo', 'RcHm_v2.0_Chr1g0326431' => 'rch', 'RcHm_v2.0_Chr1g0326451' => 'rch', 'RcHm_v2.0_Chr2g0093951' => 'rch', 'RcHm_v2.0_Chr2g0093961' => 'rch', 'RcHm_v2.0_Chr2g0104121' => 'rch', 'RcHm_v2.0_Chr2g0104151' => 'rch', 'RcHm_v2.0_Chr2g0104161' => 'rch', 'RcHm_v2.0_Chr2g0104171' => 'rch', 'RcHm_v2.0_Chr2g0104181' => 'rch', 'RcHm_v2.0_Chr2g0104191' => 'rch', 'RcHm_v2.0_Chr2g0104211' => 'rch', 'RcHm_v2.0_Chr2g0104241' => 'rch', 'RcHm_v2.0_Chr2g0104261' => 'rch', 'RcHm_v2.0_Chr2g0104271' => 'rch', 'RcHm_v2.0_Chr2g0104281' => 'rch', 'RcHm_v2.0_Chr2g0104291' => 'rch', 'RcHm_v2.0_Chr2g0104311' => 'rch', 'RcHm_v2.0_Chr2g0104321' => 'rch', 'RcHm_v2.0_Chr2g0104331' => 'rch', 'RcHm_v2.0_Chr2g0104341' => 'rch', 'RcHm_v2.0_Chr2g0104361' => 'rch', 'RcHm_v2.0_Chr2g0104381' => 'rch', 'RcHm_v2.0_Chr2g0104391' => 'rch', 'RcHm_v2.0_Chr2g0104431' => 'rch', 'RcHm_v2.0_Chr2g0104441' => 'rch', 'RcHm_v2.0_Chr2g0104541' => 'rch', 'RcHm_v2.0_Chr2g0104741' => 'rch', 'RcHm_v2.0_Chr2g0104761' => 'rch', 'RcHm_v2.0_Chr2g0158291' => 'rch', 'RcHm_v2.0_Chr2g0170371' => 'rch', 'RcHm_v2.0_Chr2g0170631' => 'rch', 'RcHm_v2.0_Chr3g0473971' => 'rch', 'RcHm_v2.0_Chr3g0480491' => 'rch', 'RcHm_v2.0_Chr3g0480501' => 'rch', 'RcHm_v2.0_Chr3g0480541' => 'rch', 'RcHm_v2.0_Chr3g0480561' => 'rch', 'RcHm_v2.0_Chr3g0485281' => 'rch', 'RcHm_v2.0_Chr3g0485291' => 'rch', 'RcHm_v2.0_Chr4g0411541' => 'rch', 'RcHm_v2.0_Chr6g0285471' => 'rch', 'RcHm_v2.0_Chr6g0299881' => 'rch', 'RcHm_v2.0_Chr7g0186621' => 'rch', 'RcHm_v2.0_Chr7g0186691' => 'rch', 'RcHm_v2.0_Chr7g0230541' => 'rch', 'RcHm_v2.0_Chr7g0230551' => 'rch', 'RcHm_v2.0_Chr7g0230651' => 'rch', 'RcHm_v2.0_Chr7g0230701' => 'rch', 'Rhsim06G0041900' => 'rsi', 'Rhsim08G0104400' => 'rsi', 'Rhsim08G0104500' => 'rsi', 'RhsimUnG0071100' => 'rsi', 'Sabra02G0101400' => 'sbr', 'Sabra07G0031700' => 'sbr', 'Sabra07G0034700' => 'sbr', 'Sabra07G0034800' => 'sbr', 'Sabra07G0034900' => 'sbr', 'Sabra07G0035000' => 'sbr', 'Sabra07G0035100' => 'sbr', 'Sabra07G0035200' => 'sbr', 'Sabra07G0035300' => 'sbr', 'Sabra07G0035400' => 'sbr', 'Sabra14G0025500' => 'sbr', 'SalBow7G4054' => 'sbo', 'Sc02g0006820' => 'sci', 'Sed0001841' => 'sed', 'Sed0018592' => 'sed', 'Sed0020887' => 'sed', 'SEGI_00260' => 'sgi', 'SEGI_00309' => 'sgi', 'SEGI_00691' => 'sgi', 'SEGI_00731' => 'sgi', 'SEGI_00746' => 'sgi', 'SEGI_00903' => 'sgi', 'SEGI_00922' => 'sgi', 'SEGI_01171' => 'sgi', 'SEGI_01415' => 'sgi', 'SEGI_01512' => 'sgi', 'SEGI_02473' => 'sgi', 'SEGI_03060' => 'sgi', 'SEGI_03084' => 'sgi', 'SEGI_03111' => 'sgi', 'SEGI_03412' => 'sgi', 'SEGI_03576' => 'sgi', 'SEGI_04079' => 'sgi', 'SEGI_04143' => 'sgi', 'SEGI_04387' => 'sgi', 'SEGI_04503' => 'sgi', 'SEGI_04614' => 'sgi', 'SEGI_04732' => 'sgi', 'SEGI_04919' => 'sgi', 'SEGI_05414' => 'sgi', 'SEGI_06047' => 'sgi', 'SEGI_06237' => 'sgi', 'SEGI_06831' => 'sgi', 'SEGI_07025' => 'sgi', 'SEGI_07469' => 'sgi', 'SEGI_08019' => 'sgi', 'SEGI_08546' => 'sgi', 'SEGI_08559' => 'sgi', 'SEGI_08709' => 'sgi', 'SEGI_09169' => 'sgi', 'SEGI_09241' => 'sgi', 'SEGI_09846' => 'sgi', 'SEGI_09857' => 'sgi', 'SEGI_10009' => 'sgi', 'SEGI_10208' => 'sgi', 'SEGI_10837' => 'sgi', 'SEGI_11481' => 'sgi', 'SEGI_12085' => 'sgi', 'SEGI_13035' => 'sgi', 'SEGI_13225' => 'sgi', 'SEGI_13661' => 'sgi', 'SEGI_13932' => 'sgi', 'SEGI_14465' => 'sgi', 'SEGI_14487' => 'sgi', 'SEGI_14973' => 'sgi', 'SEGI_15295' => 'sgi', 'SEGI_15382' => 'sgi', 'SEGI_16083' => 'sgi', 'SEGI_16186' => 'sgi', 'SEGI_17203' => 'sgi', 'SEGI_17730' => 'sgi', 'SEGI_18969' => 'sgi', 'SEGI_19028' => 'sgi', 'SEGI_19151' => 'sgi', 'SEGI_19730' => 'sgi', 'SEGI_19773' => 'sgi', 'SEGI_20001' => 'sgi', 'SEGI_20905' => 'sgi', 'SEGI_21785' => 'sgi', 'SEGI_22007' => 'sgi', 'SEGI_22367' => 'sgi', 'SEGI_22888' => 'sgi', 'SEGI_23296' => 'sgi', 'SEGI_23396' => 'sgi', 'SEGI_23627' => 'sgi', 'SEGI_23652' => 'sgi', 'SEGI_24241' => 'sgi', 'SEGI_24837' => 'sgi', 'SEGI_25193' => 'sgi', 'SEGI_25902' => 'sgi', 'SEGI_25995' => 'sgi', 'SEGI_26111' => 'sgi', 'SEGI_26500' => 'sgi', 'SEGI_26947' => 'sgi', 'SEGI_26981' => 'sgi', 'SEGI_27236' => 'sgi', 'SEGI_27392' => 'sgi', 'SEGI_27573' => 'sgi', 'SEGI_27994' => 'sgi', 'SEGI_28684' => 'sgi', 'SEGI_29667' => 'sgi', 'SEGI_29874' => 'sgi', 'SEGI_30471' => 'sgi', 'SEGI_30694' => 'sgi', 'SEGI_31116' => 'sgi', 'SEGI_31166' => 'sgi', 'SEGI_31901' => 'sgi', 'SEGI_31973' => 'sgi', 'SEGI_32646' => 'sgi', 'SEGI_32933' => 'sgi', 'SEGI_33070' => 'sgi', 'SEGI_33717' => 'sgi', 'SEGI_34353' => 'sgi', 'SEGI_34482' => 'sgi', 'SEGI_34716' => 'sgi', 'SEGI_34849' => 'sgi', 'SEGI_35160' => 'sgi', 'SEGI_36484' => 'sgi', 'SEGI_36710' => 'sgi', 'SEGI_36954' => 'sgi', 'SEGI_39551' => 'sgi', 'SEGI_40279' => 'sgi', 'SEGI_41280' => 'sgi', 'SGA_v2.0_scaffold217G42412' => 'sas', 'Solyc02g077060.2' => 'sly', 'Solyc02g090380.4' => 'sly', 'Solyc04g079420.3' => 'sly', 'Sopen02g022000' => 'spe', 'Sopen02g035080' => 'spe', 'Sopen04g033030' => 'spe', 'Sp2g29750' => 'spa', 'Sp2g29760' => 'spa', 'Sp2g29770' => 'spa', 'Sp6g38100' => 'spa', 'Sp7g31030' => 'spa', 'TAR381G0813' => 'tar', 'TAR628G1335' => 'tar', 'THA.LOC104803687' => 'tha', 'THA.LOC104819226' => 'tha', 'Thecc.01G050400' => 'tca', 'Thecc.08G015100' => 'tca', 'Thhalv10003124m.g' => 'esa', 'Thhalv10003662m.g' => 'esa', 'Thhalv10005443m.g' => 'esa', 'Thhalv10005517m.g' => 'esa', 'Thhalv10012720m.g' => 'esa', 'Thhalv10020099m.g' => 'esa', 'Thhalv10024421m.g' => 'esa', 'TPR.G11114' => 'tpr', 'TPR.G11335' => 'tpr', 'TPR.G11338' => 'tpr', 'TPR.G11341' => 'tpr', 'TPR.G11342' => 'tpr', 'TPR.G11353' => 'tpr', 'TPR.G11364' => 'tpr', 'TPR.G13696' => 'tpr', 'TPR.G1688' => 'tpr', 'TPR.G1702' => 'tpr', 'TPR.G1717' => 'tpr', 'TPR.G18' => 'tpr', 'TPR.G19002' => 'tpr', 'TPR.G19010' => 'tpr', 'TPR.G19025' => 'tpr', 'TPR.G19028' => 'tpr', 'TPR.G20397' => 'tpr', 'TPR.G29072' => 'tpr', 'TPR.G30323' => 'tpr', 'TPR.G30328' => 'tpr', 'TPR.G30540' => 'tpr', 'TPR.G35311' => 'tpr', 'TPR.G35995' => 'tpr', 'TPR.G40614' => 'tpr', 'TWI09G1247' => 'twi', 'TWI36G0871' => 'twi', 'TWI56G0719' => 'twi', 'TWI56G1471' => 'twi', 'vmacro17917' => 'vma', 'vmacro17918' => 'vma', 'vmacro21576' => 'vma', 'VMungo0251G0147' => 'vmu', 'VMungo0251G2267' => 'vmu', 'VMungo0251G2825' => 'vmu', 'VMungo0251G3007' => 'vmu', 'VMungo0251G3107' => 'vmu', 'VMungo0647G0275' => 'vmu', 'VMungo0647G1042' => 'vmu', 'VMungo1215G3170' => 'vmu', 'Zm00001eb030390' => 'zma', 'Zm00001eb134970' => 'zma' ) $gf_id = 'HOM05D000529' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000529' ) $data_identifier = 'HOM05D000529' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 4, 'amhyb' => (int) 1, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 17, 'ath' => (int) 8, 'atr' => (int) 1, 'acertr' => (int) 1, 'cqu' => (int) 2, 'bca' => (int) 31, 'bol' => (int) 27, 'bra' => (int) 12, 'can' => (int) 4, 'cansat' => (int) 3, 'chi' => (int) 21, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 14, 'ccan' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 3, 'cil' => (int) 18, 'cla' => (int) 2, 'col' => (int) 3, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 7, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 8, 'eca' => (int) 8, 'bvu' => (int) 1, 'egr' => (int) 8, 'fan' => (int) 99, 'fve' => (int) 42, 'gma' => (int) 21, 'ghi' => (int) 7, 'gra' => (int) 4, 'vvi' => (int) 16, 'han' => (int) 19, 'cav' => (int) 5, 'hma' => (int) 1, 'sun' => (int) 1, 'lal' => (int) 8, 'lja' => (int) 9, 'lonja' => (int) 21, 'lsa' => (int) 14, 'mes' => (int) 4, 'mbi' => (int) 1, 'mdo' => (int) 40, 'mtr' => (int) 30, 'cme' => (int) 3, 'egut' => (int) 2, 'ama' => (int) 3, 'nta' => (int) 8, 'nnu' => (int) 12, 'oeu' => (int) 12, 'osa' => (int) 1, 'pax' => (int) 3, 'pgr' => (int) 8, 'stu' => (int) 2, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 1, 'ppe' => (int) 16, 'psa' => (int) 11, 'pso' => (int) 1, 'qlo' => (int) 44, 'rch' => (int) 47, 'rsi' => (int) 4, 'sbr' => (int) 11, 'sbo' => (int) 1, 'sci' => (int) 1, 'sed' => (int) 3, 'sgi' => (int) 107, 'sas' => (int) 1, 'sly' => (int) 3, 'spe' => (int) 3, 'spa' => (int) 5, 'tar' => (int) 2, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 7, 'tpr' => (int) 24, 'twi' => (int) 4, 'vma' => (int) 3, 'vmu' => (int) 8, 'zma' => (int) 2 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb134970' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1